Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_416269_417266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

416269 - 417266

Intron Length:

998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTGCA

5'SS Class:

major

3'SS Sequence:

CCTCTACCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAT

U12 Branch Point Sequence:

CATCCTCTACCC

Flanking Amino Acid:

SEHSAPSPFLTLFNPNKTVV

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

67.9

37.3

Major BPS

64.5

0.36

1.2

72.7

34.4

Major PPT

71.4

0.48

0.8

33.7

Minor 5ss

-2.1

3.3

38.4

41.8

Minor BPS

46.5

-0.2

1.9

57.48

41.2

Associated Gene:

Gene:

FAM214B

Ensembl Gene ID:

ENSAPLG00000027087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029453

413200 - 419067

5868