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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_41654_58233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

41654 - 58233

Intron Length:

16580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAA

U12 Branch Point Sequence:

TAAGAAGTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

59.6

0.24

1.3

58.7

39.9

Major PPT

81.1

0.7

0.8

73.6

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

-0.7

2.3

58.96

43.8

Associated Gene:

Gene:

RUSC2

Ensembl Gene ID:

ENSAPLG00000023823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007727

26121 - 58339

32219

ENSAPLT00000001571

26121 - 58339

32219