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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42003424_42007230_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42003424 - 42007230

Intron Length:

3807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCACTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTATTTTTCACT

Flanking Amino Acid:

PINYGEKLAMTYNALFCETS

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

82.9

0.74

0.8

77.2

30.4

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

66.1

0.59

1.7

83.9

37.2

Associated Gene:

Gene:

RASEF

Ensembl Gene ID:

ENSAPLG00000013969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034705

42000561 - 42035564

35004

ENSAPLT00000014582

42000561 - 42035564

35004