Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42013105_42016041_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42013105 - 42016041

Intron Length:

2937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

ACTTGTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTTTTTCAATA

Flanking Amino Acid:

GQSPLNPRYDRSSHSSCVDE

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

72.3

39.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

72.8

0.51

0.9

69.7

Minor 5ss

38.2

-1.3

3.1

50.1

46.5

Minor BPS

62.5

0.39

1.5

70.41

36.7

Associated Gene:

Gene:

RASEF

Ensembl Gene ID:

ENSAPLG00000013969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034705

42000561 - 42035564

35004

ENSAPLT00000014582

42000561 - 42035564

35004