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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42016134_42017260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42016134 - 42017260

Intron Length:

1127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTATCTGTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGTTCATCAAAT

Flanking Amino Acid:

NSFSKFNRSLRLANTSPGST

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

72.2

0.5

69.2

41.5

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

0.33

1.9

80.37

40.5

Associated Gene:

Gene:

RASEF

Ensembl Gene ID:

ENSAPLG00000013969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034705

42000561 - 42035564

35004

ENSAPLT00000014582

42000561 - 42035564

35004