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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42024727_42035196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42024727 - 42035196

Intron Length:

10470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

AGTCTGTTAAAA

Flanking Amino Acid:

RLGDEARFIPRQEQVSVLYQ

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

71.3

37.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

86.1

0.81

0.8

84.1

30.8

Minor 5ss

-2.1

3.3

42.6

44.4

Minor BPS

47.9

-0.1

2.1

61.15

38.3

Associated Gene:

Gene:

RASEF

Ensembl Gene ID:

ENSAPLG00000013969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034705

42000561 - 42035564

35004

ENSAPLT00000014582

42000561 - 42035564

35004