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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42059030_42060515_F

Intron Information:

Intron Rank:
150645
Intron Class:
major
Intron Phase:
Intron Coordinates:
42059030 - 42060515
Intron Length:
1486

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACA|GTGAGTCAG
5'SS Class:
major
3'SS Sequence:
ATTTATTGTTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
TGTTCTTTATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
69.9
0.47
1
59
41.7
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
79.6
0.67
1
77.6
40.7
Minor 5ss
30.3
-2.3
2.9
37.8
40.8
Minor BPS
70.4
0.72
1.5
84.38
36.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000030933
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000039680
42058931 - 42060695
1765