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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42108077_42129316_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42108077 - 42129316

Intron Length:

21240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTGTTTTAATC

Flanking Amino Acid:

CEEEEVPLDEGIQLPKEDDV

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

77.5

32.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.76

0.8

81.2

Minor 5ss

29.1

-2.4

2.8

34.7

41.7

Minor BPS

60.4

0.31

1.3

63.17

37.5

Associated Gene:

Gene:

FRMD3

Ensembl Gene ID:

ENSAPLG00000014312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014907

42107481 - 42234819

127339