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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42168193_42176725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42168193 - 42176725

Intron Length:

8533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TATAATCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAATC

Flanking Amino Acid:

PNKSIFKQMKSHPPYTMCFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.3

0.64

0.9

74.2

40.7

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

0.51

1.5

78.43

30.8

Associated Gene:

Gene:

FRMD3

Ensembl Gene ID:

ENSAPLG00000014312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014907

42107481 - 42234819

127339