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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42265274_42266229_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42265274 - 42266229

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACCCTAA

5'SS Class:

weak_major

3'SS Sequence:

TCTTTTTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TCCACATTCATT

Flanking Amino Acid:

ESVKPKRNNRLGWKFYDADD

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.17

1.3

53.1

42.7

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

87.5

0.84

0.6

88.2

21.6

Minor 5ss

47.2

-0.3

2.9

55.4

48.8

Minor BPS

47.4

-0.1

65.3

45.5

Associated Gene:

Gene:

IDNK

Ensembl Gene ID:

ENSAPLG00000017965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043889

42264860 - 42273105

8246