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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4227336_4228111_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4227336 - 4228111

Intron Length:
776

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTT|GTAAGTGCT

5'SS Class:
major

3'SS Sequence:
TTTCTTGCAATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATCAT

U12 Branch Point Sequence:
TTTCTTGCAATA

Flanking Amino Acid:
CRAYVTDFALDLDVDPKEAN

Intron Amino Acid Position:
622

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.7
0.63
1
73.6
35.1

Major BPS
88.2
0.95
0.9
88.3
28.5

Major PPT
73.2
0.52
0.9
70.2
35.2

Minor 5ss
37.9
-1.4
3.3
56.6
41.9

Minor BPS
46.4
-0.2
2.1
64.08
36.9

Associated Gene:

Gene:
MALT1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4225547 - 4250938
25392

4225547 - 4250938
25392

4225547 - 4250938
25392