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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42277097_42278624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42277097 - 42278624

Intron Length:

1528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAG

5'SS Class:

major

3'SS Sequence:

ATTTTGTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATATCTTAAAA

Flanking Amino Acid:

LQALAGANAQQLQNPEVRFQ

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.5

38.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

78.9

0.65

0.8

77.6

36.1

Minor 5ss

36.1

-1.6

3.2

46.5

48.8

Minor BPS

68.4

0.57

1.4

74.67

Associated Gene:

Gene:

UBQLN1

Ensembl Gene ID:

ENSAPLG00000014441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015048

42276941 - 42303103

26163