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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42278794_42279126_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42278794 - 42279126

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GTCGTTTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TATTATTCAAGT

Flanking Amino Acid:

LATEAPGLIPGFNPGLGGLG

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

80.6

33.8

Major BPS

84.7

0.86

74.3

40.7

Major PPT

73.8

0.54

68.5

42.1

Minor 5ss

33.5

-1.9

3.1

41.3

44.8

Minor BPS

0.11

74.44

42.2

Associated Gene:

Gene:

UBQLN1

Ensembl Gene ID:

ENSAPLG00000014441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015048

42276941 - 42303103

26163