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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42282038_42282511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42282038 - 42282511

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTCTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGATAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

TIPNLGPGLGAGMFNTPGMQ

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.8

35.3

Major BPS

64.1

0.35

1.3

45.5

Major PPT

0.72

86.9

31.1

Minor 5ss

38.4

-1.3

2.9

49.3

46.9

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

UBQLN1

Ensembl Gene ID:

ENSAPLG00000014441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015048

42276941 - 42303103

26163