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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42283977_42285745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42283977 - 42285745

Intron Length:

1769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

CCTCCCCTAAAG

Flanking Amino Acid:

ASTNSNPFGLGGLGGLAGLS

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

67.8

0.4

67.2

26.8

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

48.8

-0.2

1.9

54.92

45.6

Associated Gene:

Gene:

UBQLN1

Ensembl Gene ID:

ENSAPLG00000014441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015048

42276941 - 42303103

26163