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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42311063_42311233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42311063 - 42311233

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTGGAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

GTATGATTAACA

Flanking Amino Acid:

QTIKNELTLQTADFSMPERI

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

0.52

1.1

77.7

35.3

Major PPT

62.8

0.29

1.2

66.7

38.6

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

56.6

0.2

70.6

Associated Gene:

Gene:

GKAP1

Ensembl Gene ID:

ENSAPLG00000014453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026698

42310813 - 42325886

15074