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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42312676_42314569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42312676 - 42314569

Intron Length:

1894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTCTTTCATA

Flanking Amino Acid:

QLKNIITQWEAKYKEVKARN

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.9

36.9

Major BPS

84.7

0.86

74.3

40.7

Major PPT

84.9

0.79

0.8

80.6

30.4

Minor 5ss

42.2

-0.9

2.5

54.4

42.8

Minor BPS

71.1

0.66

1.7

82.68

32.7

Associated Gene:

Gene:

GKAP1

Ensembl Gene ID:

ENSAPLG00000014453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026698

42310813 - 42325886

15074

ENSAPLT00000015091

42308257 - 42325948

17692