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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42314672_42315058_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42314672 - 42315058

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTATTAATAAAT

Flanking Amino Acid:

DNCTSHEHNQESVMKNGRTE

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

75.9

35.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

81.8

0.72

0.9

75.5

38.4

Minor 5ss

30.8

-2.2

3.7

41.3

45.3

Minor BPS

0.11

1.9

76.49

39.1

Associated Gene:

Gene:

GKAP1

Ensembl Gene ID:

ENSAPLG00000014453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026698

42310813 - 42325886

15074

ENSAPLT00000015091

42308257 - 42325948

17692