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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42315212_42315948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42315212 - 42315948

Intron Length:

737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTACTTTTGACA

Flanking Amino Acid:

NIDNLAKKHEEVSSSQTSLS

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

84.6

0.86

41.2

Major PPT

78.6

0.64

37.8

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

65.4

0.48

1.2

71.91

33.5

Associated Gene:

Gene:

GKAP1

Ensembl Gene ID:

ENSAPLG00000014453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026698

42310813 - 42325886

15074

ENSAPLT00000015091

42308257 - 42325948

17692