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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42315972_42317004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42315972 - 42317004

Intron Length:

1033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGCCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TGTCATTTCATT

Flanking Amino Acid:

LKDFQSDSNIDNLAKKHEEV

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

41.9

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

83.8

0.76

0.8

81.1

30.9

Minor 5ss

49.9

-0

2.8

73.5

43.2

Minor BPS

0.01

1.9

70.98

40.2

Associated Gene:

Gene:

GKAP1

Ensembl Gene ID:

ENSAPLG00000014453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026698

42310813 - 42325886

15074

ENSAPLT00000015091

42308257 - 42325948

17692