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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42317138_42318601_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42317138 - 42318601

Intron Length:

1464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTCTG

5'SS Class:

major

3'SS Sequence:

TTTATTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TGGGACTTTATT

Flanking Amino Acid:

SKLEYEEHKKEYENNECTSP

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

67.2

43.7

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

84.9

0.79

0.7

36.4

Minor 5ss

-0.7

2.8

58.7

45.8

Minor BPS

48.1

-0

1.9

65.38

45.1

Associated Gene:

Gene:

GKAP1

Ensembl Gene ID:

ENSAPLG00000014453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026698

42310813 - 42325886

15074

ENSAPLT00000015091

42308257 - 42325948

17692