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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42318680_42324536_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42318680 - 42324536

Intron Length:

5857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCTT

5'SS Class:

major

3'SS Sequence:

TTTGTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GGAATGTTAATT

Flanking Amino Acid:

WQEWRQRDEQLTSEMFEADL

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

66.9

44.1

Major BPS

89.7

0.98

0.7

89.9

Major PPT

90.4

0.91

0.7

28.1

Minor 5ss

-1.7

3.8

55.9

48.3

Minor BPS

47.8

-0

62.78

41.3

Associated Gene:

Gene:

GKAP1

Ensembl Gene ID:

ENSAPLG00000014453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026698

42310813 - 42325886

15074

ENSAPLT00000015091

42308257 - 42325948

17692