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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42324681_42325627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42324681 - 42325627

Intron Length:

947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGGGA

5'SS Class:

major

3'SS Sequence:

AACTGTTTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TATTGTTTAATA

Flanking Amino Acid:

REQQQSEANELRNLAFKKIP

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

66.4

39.3

Major BPS

84.4

0.85

34.5

Major PPT

77.1

0.61

0.9

73.3

41.1

Minor 5ss

27.9

-2.5

3.5

46.8

Minor BPS

67.1

0.53

1.7

76.04

35.6

Associated Gene:

Gene:

GKAP1

Ensembl Gene ID:

ENSAPLG00000014453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026698

42310813 - 42325886

15074

ENSAPLT00000015091

42308257 - 42325948

17692