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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42356948_42358851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42356948 - 42358851

Intron Length:

1904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACGTTGT

5'SS Class:

major

3'SS Sequence:

GTTTATATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

GTGTCTGTGACA

Flanking Amino Acid:

KTYTIGGGHIASVSEDEKGI

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

71.6

40.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

77.5

0.62

0.9

74.9

39.5

Minor 5ss

-1

3.1

55.6

43.9

Minor BPS

52.6

0.08

2.1

66.49

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034516

42356188 - 42359149

2962