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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42383510_42385056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42383510 - 42385056

Intron Length:

1547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

ATGACCAATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATGAC

U12 Branch Point Sequence:

CATCCACGAACG

Flanking Amino Acid:

GKNIKALRTDYNASVSVPDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.2

83.2

30.8

Major BPS

54.6

0.12

1.1

47.1

36.1

Major PPT

60.6

0.24

1.1

52.7

41.1

Minor 5ss

35.2

-1.7

2.8

41.6

38.3

Minor BPS

42.9

-0.6

49.62

43.1

Associated Gene:

Gene:

HNRNPK

Ensembl Gene ID:

ENSAPLG00000010986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011449

42370265 - 42387544

17280