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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42463237_42465002_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
42463237 - 42465002

Intron Length:
1766

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGTAC

5'SS Class:
major

3'SS Sequence:
ACTTACTCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTTAT

U12 Branch Point Sequence:
TGTTACTTACTC

Flanking Amino Acid:
VACFMTACIAGMLTVPAVDV

Intron Amino Acid Position:
576

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.3
0.48
1.1
63
38.1

Major BPS
82.6
0.81
0.8
71.7
36

Major PPT
72.6
0.51
0.9
65.4
35.3

Minor 5ss
36
-1.6
3.4
49.9
46.7

Minor BPS
60.2
0.3
1.8
72.11
39.1

Associated Gene:

Gene:
SLC28A3

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

42461232 - 42504365
43134

42461232 - 42504365
43134