Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42472299_42473612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42472299 - 42473612

Intron Length:

1314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTGAAATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

GTCACCTGAAAT

Flanking Amino Acid:

SVLGAYISFGISASHLLTAS

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

74.8

0.62

1.1

40.5

Major PPT

62.5

0.28

51.8

41.5

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

57.3

0.31

1.7

72.28

43.7

Associated Gene:

Gene:

SLC28A3

Ensembl Gene ID:

ENSAPLG00000010433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045922

42461232 - 42504365

43134

ENSAPLT00000010888

42461232 - 42504365

43134