Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42488255_42492626_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42488255 - 42492626

Intron Length:

4372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATGTCA

5'SS Class:

major

3'SS Sequence:

CACATTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTGTTTTTCACA

Flanking Amino Acid:

SAAEEQPHLKGPLEKKYDKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

62.1

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

0.43

0.9

61.1

39.7

Minor 5ss

36.6

-1.5

3.2

39.7

45.8

Minor BPS

62.5

0.39

1.7

74.03

38.5

Associated Gene:

Gene:

SLC28A3

Ensembl Gene ID:

ENSAPLG00000010433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045922

42461232 - 42504365

43134

ENSAPLT00000010888

42461232 - 42504365

43134