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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42594194_42594524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42594194 - 42594524

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGCCCG

5'SS Class:

major

3'SS Sequence:

TTTTGGATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTTTTTTGGATT

Flanking Amino Acid:

ESCRRSPPRRAHFVEFLPLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

49.8

46.6

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

81.5

0.71

0.9

78.1

40.1

Minor 5ss

43.8

-0.7

2.8

48.9

46.8

Minor BPS

64.3

0.53

1.4

82.65

32.5

Associated Gene:

Gene:

NTRK2

Ensembl Gene ID:

ENSAPLG00000009998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042947

42593076 - 42790771

197696

ENSAPLT00000036993

42593076 - 42791685

198610

ENSAPLT00000022793

42593076 - 42791685

198610

ENSAPLT00000047802

42593076 - 42790771

197696

ENSAPLT00000043393

42593076 - 42791685

198610