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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42640717_42642278_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42640717 - 42642278

Intron Length:

1562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTACGTACA

5'SS Class:

major

3'SS Sequence:

TTTTCCAATATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATGTTCTTCACT

Flanking Amino Acid:

DQASAELTVFFAPNITFIES

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

65.1

40.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

75.8

0.58

0.9

71.1

33.5

Minor 5ss

37.9

-1.4

43.7

Minor BPS

66.5

0.6

1.7

81.61

40.3

Associated Gene:

Gene:

NTRK2

Ensembl Gene ID:

ENSAPLG00000009998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022793

42593076 - 42791685

198610

ENSAPLT00000047802

42593076 - 42790771

197696

ENSAPLT00000010449

42595125 - 42772226

177102

ENSAPLT00000043393

42593076 - 42791685

198610

ENSAPLT00000042947

42593076 - 42790771

197696

ENSAPLT00000036993

42593076 - 42791685

198610