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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42642579_42647553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42642579 - 42647553

Intron Length:

4975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCATGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCTTTTATTT

Flanking Amino Acid:

DAHFMSVPGDGSGPIVDPDV

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

84.9

26.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

74.5

0.55

0.9

68.5

36.3

Minor 5ss

-1.8

2.8

39.2

40.5

Minor BPS

62.9

0.48

1.5

80.46

35.9

Associated Gene:

Gene:

NTRK2

Ensembl Gene ID:

ENSAPLG00000009998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022793

42593076 - 42791685

198610

ENSAPLT00000010449

42595125 - 42772226

177102

ENSAPLT00000043393

42593076 - 42791685

198610

ENSAPLT00000042947

42593076 - 42790771

197696

ENSAPLT00000036993

42593076 - 42791685

198610