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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42653878_42711899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42653878 - 42711899

Intron Length:

58022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTAATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTCTAATT

Flanking Amino Acid:

FGRHSKFGMKGPSSVISNDD

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.1

0.66

0.8

71.5

38.4

Minor 5ss

38.8

-1.3

2.8

48.8

Minor BPS

62.5

0.47

1.6

79.6

37.1

Associated Gene:

Gene:

NTRK2

Ensembl Gene ID:

ENSAPLG00000009998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022793

42593076 - 42791685

198610