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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42674018_42711899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42674018 - 42711899

Intron Length:

37882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTAATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTCTAATT

Flanking Amino Acid:

WLSLQDCDNEGPSSVISNDD

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

67.8

39.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.1

0.66

0.8

71.5

38.4

Minor 5ss

25.9

-2.8

2.9

30.5

42.6

Minor BPS

62.5

0.47

1.6

79.6

37.1

Associated Gene:

Gene:

NTRK2

Ensembl Gene ID:

ENSAPLG00000009998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043393

42593076 - 42791685

198610