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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42684861_42711899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42684861 - 42711899

Intron Length:

27039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTAATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTCTAATT

Flanking Amino Acid:

NSTASDNNRLGPSSVISNDD

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

67.8

39.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.1

0.66

0.8

71.5

38.4

Minor 5ss

30.8

-2.2

31.1

42.4

Minor BPS

62.5

0.47

1.6

79.6

37.1

Associated Gene:

Gene:

NTRK2

Ensembl Gene ID:

ENSAPLG00000009998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042947

42593076 - 42790771

197696

ENSAPLT00000036993

42593076 - 42791685

198610

ENSAPLT00000010449

42595125 - 42772226

177102

ENSAPLT00000047802

42593076 - 42790771

197696