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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4268576_4271120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4268576 - 4271120

Intron Length:

2545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATCCTAAACT

Flanking Amino Acid:

RKLILKKDSKAPKLLKKIQA

Intron Amino Acid Position:

1439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.52

1.1

70.8

38.9

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

73.8

0.82

1.6

86.37

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019908

4252972 - 4317650

64679

ENSAPLT00000019613

4252972 - 4291494

38523

ENSAPLT00000043466

4252972 - 4318633

65662

ENSAPLT00000033581

4252972 - 4291494

38523