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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42712089_42745129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42712089 - 42745129

Intron Length:

33041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TGCAGCTCACTT

Flanking Amino Acid:

ITNSQLKPDTFVQHIKRHNI

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

0.28

1.1

63.1

35.8

Major PPT

92.5

0.96

0.6

88.1

21.6

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

41.9

-0.5

2.1

57.29

45.6

Associated Gene:

Gene:

NTRK2

Ensembl Gene ID:

ENSAPLG00000009998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022793

42593076 - 42791685

198610

ENSAPLT00000047802

42593076 - 42790771

197696

ENSAPLT00000010449

42595125 - 42772226

177102

ENSAPLT00000043393

42593076 - 42791685

198610

ENSAPLT00000042947

42593076 - 42790771

197696

ENSAPLT00000036993

42593076 - 42791685

198610