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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4271269_4272732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4271269 - 4272732

Intron Length:

1464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TATTCTGTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GGAAAATTAATA

Flanking Amino Acid:

DSKLLARLQRNAQDDSPVSL

Intron Amino Acid Position:

1488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

82.1

24.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

81.8

0.72

0.9

73.3

41.6

Minor 5ss

31.3

-2.1

2.7

33.5

35.5

Minor BPS

46.6

-0.2

1.8

53.57

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019908

4252972 - 4317650

64679

ENSAPLT00000019613

4252972 - 4291494

38523

ENSAPLT00000043466

4252972 - 4318633

65662

ENSAPLT00000033581

4252972 - 4291494

38523