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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42755137_42772115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42755137 - 42772115

Intron Length:

16979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTGTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACAACTTTTATT

Flanking Amino Acid:

RDVYSTDYYRLFQFSQRKYR

Intron Amino Acid Position:

756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.5

0.78

0.9

77.1

41.8

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

49.8

0.07

1.6

63.38

41.5

Associated Gene:

Gene:

NTRK2

Ensembl Gene ID:

ENSAPLG00000009998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010449

42595125 - 42772226

177102