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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42755137_42789599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42755137 - 42789599

Intron Length:

34463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTATTTCTGACT

Flanking Amino Acid:

RDVYSTDYYRVGGHTMLPIR

Intron Amino Acid Position:

955

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.7

0.8

84.7

30.2

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

60.2

0.4

1.6

79.95

35.8

Associated Gene:

Gene:

NTRK2

Ensembl Gene ID:

ENSAPLG00000009998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042947

42593076 - 42790771

197696

ENSAPLT00000036993

42593076 - 42791685

198610

ENSAPLT00000022793

42593076 - 42791685

198610

ENSAPLT00000047802

42593076 - 42790771

197696

ENSAPLT00000043393

42593076 - 42791685

198610