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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_428463_429646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

428463 - 429646

Intron Length:

1184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

TAGTGTGTGACA

Flanking Amino Acid:

NGILQHLYPTVDSGEWDFLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.8

42.2

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

85.8

0.81

0.8

80.7

31.4

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

44.6

-0.4

2.3

58.24

Associated Gene:

Gene:

PIGO

Ensembl Gene ID:

ENSAPLG00000016451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030364

427885 - 439016

11132