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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42960107_42962179_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42960107 - 42962179

Intron Length:

2073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGGGCGGA

5'SS Class:

weak_major

3'SS Sequence:

TACCCTTTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TATTCCTTAGAT

Flanking Amino Acid:

KGTISSIVHSLCKPLRSGLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.6

0.06

1.2

43.6

Major BPS

85.7

0.89

0.8

22.2

Major PPT

78.6

0.64

0.8

76.9

31.4

Minor 5ss

31.8

-2.1

3.6

46.1

49.1

Minor BPS

71.5

0.75

1.6

87.1

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025552

42960049 - 42962742

2694