Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_429771_430456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

429771 - 430456

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATAAAA

5'SS Class:

major

3'SS Sequence:

TCTCAGGGCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

TTTTAGGCAACA

Flanking Amino Acid:

KKLTQMNEMLSSFLKSLVEH

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

0.9

74.9

29.4

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

60.6

0.24

1.1

Minor 5ss

27.4

-2.6

2.7

31.2

42.4

Minor BPS

-0.5

2.8

68.54

43.7

Associated Gene:

Gene:

PIGO

Ensembl Gene ID:

ENSAPLG00000016451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032766

426470 - 435458

8989