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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42978180_42990777_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42978180 - 42990777

Intron Length:

12598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTACAC

5'SS Class:

major

3'SS Sequence:

TTGTTCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

AAGCTTTTAACA

Flanking Amino Acid:

ELIESSCKVTSPTTYVLDED

Intron Amino Acid Position:

1192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

58.8

40.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

84.5

0.78

0.8

82.2

34.1

Minor 5ss

30.9

-2.2

3.3

41.7

Minor BPS

62.4

0.39

1.2

63.9

36.2

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042098

42978002 - 43041225

63224

ENSAPLT00000022194

42978002 - 43041225

63224