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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42990939_42992236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

42990939 - 42992236

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAGGTATT

5'SS Class:

major

3'SS Sequence:

ATTTTTAAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTTTTAAAT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

77.3

37.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.8

0.42

69.4

40.2

Minor 5ss

42.1

-0.9

3.2

61.1

38.7

Minor BPS

74.5

0.85

1.2

85.98

33.4

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001461

42990778 - 43026764

35987