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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42990939_42996164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42990939 - 42996164

Intron Length:

5226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTAAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTTTTAAAT

Flanking Amino Acid:

LCGCDQGKYKGLQIGTRELE

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.8

0.42

69.4

40.2

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

74.5

0.85

1.2

85.98

33.4

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022194

42978002 - 43041225

63224

ENSAPLT00000042098

42978002 - 43041225

63224