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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_42992643_42996164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42992643 - 42996164

Intron Length:

3522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTCCTTAATG

Flanking Amino Acid:

LCGCDQGKYKGLFLPVISVV

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.5

0.46

1.1

68.6

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

82.2

0.87

1.2

79.19

37.7

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025918

42992378 - 43041128

48751