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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43001714_43003373_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

43001714 - 43003373

Intron Length:

1660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGGGGATGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATTT

Flanking Amino Acid:

HYPYTYSTLKMHLQKLESMH

Intron Amino Acid Position:

857

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.9

33.7

Major BPS

100

1.24

0.5

100

Major PPT

54.2

0.09

1.2

52.9

45.4

Minor 5ss

27.4

-2.6

2.7

31.6

42.2

Minor BPS

68.3

0.65

1.8

89.23

35.4

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042098

42978002 - 43041225

63224

ENSAPLT00000025918

42992378 - 43041128

48751

ENSAPLT00000022194

42978002 - 43041225

63224

ENSAPLT00000001461

42990778 - 43026764

35987