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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43004271_43005788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43004271 - 43005788

Intron Length:

1518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTTCCTTGAAG

Flanking Amino Acid:

CEKSNSQFNYGMQPLMYSVQ

Intron Amino Acid Position:

779

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.8

39.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

0.72

0.9

83.8

24.9

Minor 5ss

40.1

-1.1

3.2

57.3

46.8

Minor BPS

76.7

0.7

1.4

80.13

35.6

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042098

42978002 - 43041225

63224

ENSAPLT00000025918

42992378 - 43041128

48751

ENSAPLT00000022194

42978002 - 43041225

63224

ENSAPLT00000001461

42990778 - 43026764

35987