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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43006114_43006395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43006114 - 43006395

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTACCCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TCTTTTGTACCC

Flanking Amino Acid:

DRVVYDLDNSSWSVPEEADV

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

73.5

0.53

0.8

71.4

34.7

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

47.9

-0.1

2.2

64.58

42.1

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022194

42978002 - 43041225

63224

ENSAPLT00000001461

42990778 - 43026764

35987

ENSAPLT00000042098

42978002 - 43041225

63224

ENSAPLT00000025918

42992378 - 43041128

48751