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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43010772_43011066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43010772 - 43011066

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTATATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTCTTTTATA

Flanking Amino Acid:

FFPELSENFQECDLVSKEPK

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.3

0.59

1.1

80.2

36.5

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

65.9

0.5

1.6

74.52

37.4

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042098

42978002 - 43041225

63224

ENSAPLT00000025918

42992378 - 43041128

48751

ENSAPLT00000022194

42978002 - 43041225

63224

ENSAPLT00000001461

42990778 - 43026764

35987